Analysis of Ligand-Protein Contacts in PDB entry:
5VKS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 5VKS. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GLC
C
1 12ALPHA-D-GLUCOPYRANOSE
lig 2
GAL
C
2 11BETA-D-GALACTOPYRANOSE
lig 3
NAG
C
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
GAL
C
4 11BETA-D-GALACTOPYRANOSE
lig 5
FUC
C
5 10ALPHA-L-FUCOPYRANOSE
lig 6
GLC
D
1 12ALPHA-D-GLUCOPYRANOSE
lig 7
GAL
D
2 11BETA-D-GALACTOPYRANOSE
lig 8
NAG
D
3 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
GAL
D
4 11BETA-D-GALACTOPYRANOSE
lig 10
FUC
D
5 10ALPHA-L-FUCOPYRANOSE
lig 11
SO4
A
301 5SULFATE ION
lig 12
GOL
A
302 6GLYCEROL
lig 13
SO4
B
301 5SULFATE ION
lig 14
GOL
B
302 6GLYCEROL
lig 15
GOL
B
303 6GLYCEROL
lig 16
GOL
B
304 6GLYCEROL