Analysis of Ligand-Protein Contacts in PDB entry:
5VXX


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 63 ligands in PDB entry 5VXX. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
B6D
V
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 2
GLA
V
2 11ALPHA-D-GALACTOPYRANOSE
lig 3
B6D
W
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 4
GLA
W
2 11ALPHA-D-GALACTOPYRANOSE
lig 5
B6D
X
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 6
GLA
X
2 11ALPHA-D-GALACTOPYRANOSE
lig 7
B6D
Y
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 8
GLA
Y
2 11ALPHA-D-GALACTOPYRANOSE
lig 9
B6D
Z
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 10
GLA
Z
2 11ALPHA-D-GALACTOPYRANOSE
lig 11
B6D
a
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 12
GLA
a
2 11ALPHA-D-GALACTOPYRANOSE
lig 13
B6D
b
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 14
GLA
b
2 11ALPHA-D-GALACTOPYRANOSE
lig 15
B6D
c
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 16
GLA
c
2 11ALPHA-D-GALACTOPYRANOSE
lig 17
B6D
d
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 18
GLA
d
2 11ALPHA-D-GALACTOPYRANOSE
lig 19
B6D
e
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 20
GLA
e
2 11ALPHA-D-GALACTOPYRANOSE
lig 21
B6D
f
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 22
GLA
f
2 11ALPHA-D-GALACTOPYRANOSE
lig 23
B6D
g
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 24
GLA
g
2 11ALPHA-D-GALACTOPYRANOSE
lig 25
B6D
h
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 26
GLA
h
2 11ALPHA-D-GALACTOPYRANOSE
lig 27
B6D
i
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 28
GLA
i
2 11ALPHA-D-GALACTOPYRANOSE
lig 29
B6D
j
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 30
GLA
j
2 11ALPHA-D-GALACTOPYRANOSE
lig 31
B6D
k
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 32
GLA
k
2 11ALPHA-D-GALACTOPYRANOSE
lig 33
B6D
l
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 34
GLA
l
2 11ALPHA-D-GALACTOPYRANOSE
lig 35
B6D
m
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 36
GLA
m
2 11ALPHA-D-GALACTOPYRANOSE
lig 37
B6D
n
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 38
GLA
n
2 11ALPHA-D-GALACTOPYRANOSE
lig 39
B6D
o
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 40
GLA
o
2 11ALPHA-D-GALACTOPYRANOSE
lig 41
B6D
p
1 162,4-BISACETAMIDO-2,4,6-TRIDEOXY-BETA-D-GLU
lig 42
GLA
p
2 11ALPHA-D-GALACTOPYRANOSE
lig 43
OPE
A
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 44
OPE
B
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 45
OPE
C
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 46
OPE
D
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 47
OPE
E
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 48
OPE
F
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 49
OPE
G
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 50
OPE
H
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 51
OPE
I
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 52
OPE
J
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 53
OPE
K
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 54
OPE
L
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 55
OPE
M
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 56
OPE
N
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 57
OPE
O
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 58
OPE
P
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 59
OPE
Q
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 60
OPE
R
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 61
OPE
S
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 62
OPE
T
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER
lig 63
OPE
U
203 8PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER