Analysis of Ligand-Protein Contacts in PDB entry:
5VZF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 7 ligands in PDB entry 5VZF. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TTP
A
701 13THYMIDINE-5'-TRIPHOSPHATE
lig 2
MG
A
702 1MAGNESIUM ION
lig 3
NA
A
704 1SODIUM ION
lig 4
NA
A
705 1SODIUM ION
lig 5
EDO
A
706 41,2-ETHANEDIOL
lig 6
MG
T
101 1MAGNESIUM ION
lig 7
MG
P
702 1MAGNESIUM ION