Analysis of Ligand-Protein Contacts in PDB entry:
5W11


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 23 ligands in PDB entry 5W11. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PCA
A
1 8PYROGLUTAMIC ACID
lig 2
PCA
B
1 8PYROGLUTAMIC ACID
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
MAN
C
3 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
MAN
D
3 11ALPHA-D-MANNOPYRANOSE
lig 9
GLC
E
1 12ALPHA-D-GLUCOPYRANOSE
lig 10
BGC
E
2 11BETA-D-GLUCOPYRANOSE
lig 11
BGC
E
3 11BETA-D-GLUCOPYRANOSE
lig 12
GLC
F
1 12ALPHA-D-GLUCOPYRANOSE
lig 13
BGC
F
2 11BETA-D-GLUCOPYRANOSE
lig 14
BGC
F
3 11BETA-D-GLUCOPYRANOSE
lig 15
GLC
G
1 12ALPHA-D-GLUCOPYRANOSE
lig 16
BGC
G
2 11BETA-D-GLUCOPYRANOSE
lig 17
BGC
G
3 11BETA-D-GLUCOPYRANOSE
lig 18
GLC
H
1 12ALPHA-D-GLUCOPYRANOSE
lig 19
BGC
H
2 11BETA-D-GLUCOPYRANOSE
lig 20
BGC
H
3 11BETA-D-GLUCOPYRANOSE
lig 21
MAN
A
504 11ALPHA-D-MANNOPYRANOSE
lig 22
MAN
B
504 11ALPHA-D-MANNOPYRANOSE
lig 23
144
B
507 8TRIS-HYDROXYMETHYL-METHYL-AMMONIUM