Analysis of Ligand-Protein Contacts in PDB entry:
5WV3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 24 ligands in PDB entry 5WV3. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
198 10PHOSPHOSERINE
lig 2
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
CA
A
601 1CALCIUM ION
lig 5
HEM
A
602 43PROTOPORPHYRIN IX CONTAINING FE
lig 6
NAG
A
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
A
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
A
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
IOD
A
606 1IODIDE ION
lig 10
OSM
A
607 41-(OXIDOSULFANYL)METHANAMINE
lig 11
OSM
A
608 41-(OXIDOSULFANYL)METHANAMINE
lig 12
OSM
A
609 41-(OXIDOSULFANYL)METHANAMINE
lig 13
OSM
A
610 41-(OXIDOSULFANYL)METHANAMINE
lig 14
OSM
A
611 41-(OXIDOSULFANYL)METHANAMINE
lig 15
OSM
A
612 41-(OXIDOSULFANYL)METHANAMINE
lig 16
OSM
A
613 41-(OXIDOSULFANYL)METHANAMINE
lig 17
OSM
A
614 41-(OXIDOSULFANYL)METHANAMINE
lig 18
OSM
A
615 41-(OXIDOSULFANYL)METHANAMINE
lig 19
GOL
A
616 6GLYCEROL
lig 20
IOD
A
617 1IODIDE ION
lig 21
BR
A
618 1BROMIDE ION
lig 22
IOD
A
619 1IODIDE ION
lig 23
OSM
A
620 41-(OXIDOSULFANYL)METHANAMINE
lig 24
GOL
A
621 6GLYCEROL