Analysis of Ligand-Protein Contacts in PDB entry:
5YBI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 46 ligands in PDB entry 5YBI. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SO4
A
501 5SULFATE ION
lig 2
SO4
A
502 5SULFATE ION
lig 3
SO4
A
503 5SULFATE ION
lig 4
SO4
A
504 5SULFATE ION
lig 5
ANP
A
505 31PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTE
lig 6
MG
A
506 1MAGNESIUM ION
lig 7
MG
A
507 1MAGNESIUM ION
lig 8
MG
A
508 1MAGNESIUM ION
lig 9
MG
A
509 1MAGNESIUM ION
lig 10
MG
A
510 1MAGNESIUM ION
lig 11
MG
A
511 1MAGNESIUM ION
lig 12
MG
A
512 1MAGNESIUM ION
lig 13
MG
A
513 1MAGNESIUM ION
lig 14
MG
A
514 1MAGNESIUM ION
lig 15
MG
A
515 1MAGNESIUM ION
lig 16
MG
A
516 1MAGNESIUM ION
lig 17
MG
A
517 1MAGNESIUM ION
lig 18
MG
A
518 1MAGNESIUM ION
lig 19
MG
A
519 1MAGNESIUM ION
lig 20
MG
A
520 1MAGNESIUM ION
lig 21
MG
A
521 1MAGNESIUM ION
lig 22
SO4
B
501 5SULFATE ION
lig 23
SO4
B
502 5SULFATE ION
lig 24
SO4
B
503 5SULFATE ION
lig 25
MG
B
504 1MAGNESIUM ION
lig 26
MG
B
505 1MAGNESIUM ION
lig 27
MG
B
506 1MAGNESIUM ION
lig 28
MG
B
507 1MAGNESIUM ION
lig 29
MG
B
508 1MAGNESIUM ION
lig 30
MG
B
509 1MAGNESIUM ION
lig 31
MG
B
510 1MAGNESIUM ION
lig 32
MG
B
511 1MAGNESIUM ION
lig 33
MG
B
512 1MAGNESIUM ION
lig 34
MG
B
513 1MAGNESIUM ION
lig 35
MG
B
514 1MAGNESIUM ION
lig 36
MG
B
515 1MAGNESIUM ION
lig 37
MG
B
516 1MAGNESIUM ION
lig 38
MG
B
517 1MAGNESIUM ION
lig 39
MG
B
518 1MAGNESIUM ION
lig 40
MG
B
519 1MAGNESIUM ION
lig 41
MG
B
520 1MAGNESIUM ION
lig 42
MG
B
521 1MAGNESIUM ION
lig 43
MG
B
522 1MAGNESIUM ION
lig 44
MG
B
523 1MAGNESIUM ION
lig 45
MG
B
524 1MAGNESIUM ION
lig 46
MG
B
525 1MAGNESIUM ION