Analysis of Ligand-Protein Contacts in PDB entry:
5YG7


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 5YG7. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
RI2
A
401 181,5-DI-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE
lig 2
K
A
402 1POTASSIUM ION
lig 3
MRD
A
403 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 4
5GP
A
404 24GUANOSINE-5'-MONOPHOSPHATE
lig 5
RI2
B
401 181,5-DI-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE
lig 6
K
B
402 1POTASSIUM ION
lig 7
5GP
B
403 24GUANOSINE-5'-MONOPHOSPHATE
lig 8
5GP
B
404 24GUANOSINE-5'-MONOPHOSPHATE
lig 9
RI2
C
401 181,5-DI-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE
lig 10
K
C
402 1POTASSIUM ION
lig 11
5GP
C
403 24GUANOSINE-5'-MONOPHOSPHATE
lig 12
5GP
C
404 24GUANOSINE-5'-MONOPHOSPHATE