Analysis of Ligand-Protein Contacts in PDB entry:
5YIR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 5YIR. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NI
D
201 1NICKEL (II) ION
lig 2
NI
D
202 1NICKEL (II) ION
lig 3
NI
D
203 1NICKEL (II) ION
lig 4
NI
A
201 1NICKEL (II) ION
lig 5
NI
A
202 1NICKEL (II) ION
lig 6
NI
A
203 1NICKEL (II) ION
lig 7
NI
A
204 1NICKEL (II) ION
lig 8
NI
B
201 1NICKEL (II) ION
lig 9
NI
B
202 1NICKEL (II) ION
lig 10
NI
B
203 1NICKEL (II) ION