Analysis of Ligand-Protein Contacts in PDB entry:
5YLV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 5YLV. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
BFD
A
385 12ASPARTATE BERYLLIUM TRIFLUORIDE
lig 2
8WX
A
1101 21 YL)ETHANENITRILE
lig 3
MG
A
1102 1MAGNESIUM ION
lig 4
CE1
A
1103 29O-DODECANYL OCTAETHYLENE GLYCOL
lig 5
RB
A
1104 1RUBIDIUM ION
lig 6
RB
A
1105 1RUBIDIUM ION
lig 7
RB
A
1106 1RUBIDIUM ION
lig 8
NAG
B
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
B
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
B
303 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
PCW
B
304 541,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 12
CE1
B
305 19O-DODECANYL OCTAETHYLENE GLYCOL