Analysis of Ligand-Protein Contacts in PDB entry:
5YQS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 36 ligands in PDB entry 5YQS. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
BGC
F
1 12BETA-D-GLUCOPYRANOSE
lig 8
XYS
F
2 9ALPHA-D-XYLOPYRANOSE
lig 9
GLC
G
1 12ALPHA-D-GLUCOPYRANOSE
lig 10
XYS
G
2 9ALPHA-D-XYLOPYRANOSE
lig 11
BGC
H
1 12BETA-D-GLUCOPYRANOSE
lig 12
XYS
H
2 9ALPHA-D-XYLOPYRANOSE
lig 13
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
BGC
L
1 12BETA-D-GLUCOPYRANOSE
lig 20
XYS
L
2 9ALPHA-D-XYLOPYRANOSE
lig 21
GLC
M
1 12ALPHA-D-GLUCOPYRANOSE
lig 22
XYS
M
2 9ALPHA-D-XYLOPYRANOSE
lig 23
BGC
N
1 12BETA-D-GLUCOPYRANOSE
lig 24
XYS
N
2 9ALPHA-D-XYLOPYRANOSE
lig 25
NAG
A
801 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
A
804 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
A
809 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
A
810 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
A
811 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
CA
A
812 1CALCIUM ION
lig 31
BGC
A
815 12BETA-D-GLUCOPYRANOSE
lig 32
NAG
B
801 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
B
804 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
B
809 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
B
810 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
CA
B
811 1CALCIUM ION