Analysis of Ligand-Protein Contacts in PDB entry:
5YTM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 9 ligands in PDB entry 5YTM. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CU
A
401 1COPPER (II) ION
lig 2
CU
A
402 1COPPER (II) ION
lig 3
CU
A
403 1COPPER (II) ION
lig 4
CU
A
404 1COPPER (II) ION
lig 5
ACY
A
405 4ACETIC ACID
lig 6
ACY
A
406 4ACETIC ACID
lig 7
MRD
A
407 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 8
SO4
A
408 5SULFATE ION
lig 9
SO4
A
409 5SULFATE ION