Analysis of Ligand-Protein Contacts in PDB entry:
5YTY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 5YTY. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
DSN
D
1 6D-SERINE
lig 2
N2C
D
3 8N,S-DIMETHYLCYSTEINE
lig 3
MVA
D
4 8N-METHYLVALINE
lig 4
DSN
D
5 6D-SERINE
lig 5
NCY
D
7 7N-METHYLCYSTEINE
lig 6
MVA
D
8 8N-METHYLVALINE
lig 7
DSN
F
1 6D-SERINE
lig 8
N2C
F
3 8N,S-DIMETHYLCYSTEINE
lig 9
MVA
F
4 8N-METHYLVALINE
lig 10
DSN
F
5 6D-SERINE
lig 11
NCY
F
7 7N-METHYLCYSTEINE
lig 12
MVA
F
8 8N-METHYLVALINE
lig 13
MG
A
101 1MAGNESIUM ION
lig 14
MN
B
101 1MANGANESE (II) ION
lig 15
MG
B
102 1MAGNESIUM ION
lig 16
QUI
D
101 122-CARBOXYQUINOXALINE
lig 17
QUI
D
102 122-CARBOXYQUINOXALINE
lig 18
QUI
F
101 122-CARBOXYQUINOXALINE
lig 19
QUI
F
102 122-CARBOXYQUINOXALINE