Analysis of Ligand-Protein Contacts in PDB entry:
5YVP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 5YVP. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CA
A
301 1CALCIUM ION
lig 2
CA
A
302 1CALCIUM ION
lig 3
PG4
A
303 13TETRAETHYLENE GLYCOL
lig 4
CA
B
301 1CALCIUM ION
lig 5
CA
B
302 1CALCIUM ION
lig 6
PG4
B
303 13TETRAETHYLENE GLYCOL
lig 7
CA
C
301 1CALCIUM ION
lig 8
CA
C
302 1CALCIUM ION
lig 9
CA
D
301 1CALCIUM ION
lig 10
CA
D
302 1CALCIUM ION