Analysis of Ligand-Protein Contacts in PDB entry:
5AB0


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 40 ligands in PDB entry 5AB0. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
2X0
E
1 13[(1R)-1-AMINO-3-PHENYLPROPYL]PHOSPHONIC AC
lig 2
7GA
E
2 82,4-DIMETHYLPENTANAL
lig 3
LYN
E
10 102,6-DIAMINO-HEXANOIC ACID AMIDE
lig 4
2X0
F
1 13[(1R)-1-AMINO-3-PHENYLPROPYL]PHOSPHONIC AC
lig 5
7GA
F
2 82,4-DIMETHYLPENTANAL
lig 6
LYN
F
10 102,6-DIAMINO-HEXANOIC ACID AMIDE
lig 7
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 12
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 15
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
BMA
I
3 11BETA-D-MANNOPYRANOSE
lig 20
BMA
I
4 11BETA-D-MANNOPYRANOSE
lig 21
BMA
I
5 11BETA-D-MANNOPYRANOSE
lig 22
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
ZN
A
1008 1ZINC ION
lig 25
NAG
A
1069 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
A
1070 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
A
1081 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
A
1082 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
EDO
A
1964 41,2-ETHANEDIOL
lig 30
EDO
A
1965 41,2-ETHANEDIOL
lig 31
MES
A
2002 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 32
NAG
C
1006 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
C
1009 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
C
1010 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
C
1011 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
C
1012 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
C
1013 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
ZN
C
1020 1ZINC ION
lig 39
EDO
C
1962 41,2-ETHANEDIOL
lig 40
EDO
C
1963 41,2-ETHANEDIOL