Analysis of Ligand-Protein Contacts in PDB entry:
5AF9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 5AF9. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TYS
I
526 16O-SULFO-L-TYROSINE
lig 2
NAG
H
1060 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NA
H
1246 1SODIUM ION
lig 4
NA
H
1247 1SODIUM ION
lig 5
DMS
H
1248 4DIMETHYL SULFOXIDE
lig 6
DMS
H
1249 4DIMETHYL SULFOXIDE
lig 7
SJR
H
1250 174-METHOXY-N-(PYRIDIN-2-YL)BENZAMIDE
lig 8
PO4
H
1251 5PHOSPHATE ION
lig 9
GOL
H
1252 6GLYCEROL
lig 10
GOL
H
1253 6GLYCEROL
lig 11
GOL
H
1254 6GLYCEROL
lig 12
EDO
H
1255 41,2-ETHANEDIOL