Analysis of Ligand-Protein Contacts in PDB entry:
5AFY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 5AFY. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TYS
I
563 16O-SULFO-L-TYROSINE
lig 2
NA
H
1246 1SODIUM ION
lig 3
NA
H
1247 1SODIUM ION
lig 4
WCE
H
1248 103-CHLORO-BENZAMIDE
lig 5
DMS
H
1249 4DIMETHYL SULFOXIDE
lig 6
DMS
H
1250 4DIMETHYL SULFOXIDE
lig 7
PO4
H
1251 5PHOSPHATE ION
lig 8
GOL
H
1252 6GLYCEROL
lig 9
GOL
H
1253 6GLYCEROL
lig 10
NAG
H
1256 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE