Analysis of Ligand-Protein Contacts in PDB entry:
5AG1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 5AG1. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
CAC
A
1449 5CACODYLATE ION
lig 4
GOL
A
1450 6GLYCEROL
lig 5
GOL
A
1451 6GLYCEROL
lig 6
GOL
A
1452 6GLYCEROL
lig 7
GOL
A
1453 6GLYCEROL
lig 8
NAG
A
1455 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
A
1456 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
N7H
A
1458 46DELTA-MESO NITROHEME
lig 11
FMT
A
1459 3FORMIC ACID
lig 12
NO2
A
1460 3NITRITE ION
lig 13
CAC
B
1449 5CACODYLATE ION
lig 14
GOL
B
1450 6GLYCEROL
lig 15
GOL
B
1451 6GLYCEROL
lig 16
GOL
B
1452 6GLYCEROL
lig 17
GOL
B
1453 6GLYCEROL
lig 18
NAG
B
1454 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
B
1455 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
N7H
B
1456 46DELTA-MESO NITROHEME
lig 21
NO2
B
1457 3NITRITE ION