Analysis of Ligand-Protein Contacts in PDB entry:
5AGU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 5AGU. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ACE
C
1 3ACETYL GROUP
lig 2
MVA
C
2 8N-METHYLVALINE
lig 3
MP8
C
3 8(4R)-4-METHYL-L-PROLINE
lig 4
NZC
C
4 8N-METHYLIDENE-L-THREONINE
lig 5
MP8
C
6 8(4R)-4-METHYL-L-PROLINE
lig 6
MVA
C
8 8N-METHYLVALINE
lig 7
MLU
C
10 9N-METHYL-D-LEUCINE
lig 8
ACE
D
1 3ACETYL GROUP
lig 9
MVA
D
2 8N-METHYLVALINE
lig 10
MP8
D
3 8(4R)-4-METHYL-L-PROLINE
lig 11
NZC
D
4 8N-METHYLIDENE-L-THREONINE
lig 12
MP8
D
6 8(4R)-4-METHYL-L-PROLINE
lig 13
MVA
D
8 8N-METHYLVALINE
lig 14
MLU
D
10 9N-METHYL-D-LEUCINE
lig 15
BU3
A
1403 6(R,R)-2,3-BUTANEDIOL
lig 16
TRS
A
1404 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL