Analysis of Ligand-Protein Contacts in PDB entry:
5AP0


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 20 ligands in PDB entry 5AP0. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
686 11PHOSPHOTHREONINE
lig 2
AU5
A
1795 33 ONE
lig 3
P4C
A
1796 22O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL
lig 4
P4C
A
1797 16O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL
lig 5
DMS
A
1798 4DIMETHYL SULFOXIDE
lig 6
DMS
A
1799 4DIMETHYL SULFOXIDE
lig 7
EDO
A
1800 41,2-ETHANEDIOL
lig 8
EDO
A
1801 41,2-ETHANEDIOL
lig 9
EDO
A
1802 41,2-ETHANEDIOL
lig 10
EDO
A
1803 41,2-ETHANEDIOL
lig 11
EDO
A
1804 41,2-ETHANEDIOL
lig 12
EDO
A
1805 41,2-ETHANEDIOL
lig 13
EDO
A
1806 41,2-ETHANEDIOL
lig 14
EDO
A
1807 41,2-ETHANEDIOL
lig 15
EDO
A
1808 41,2-ETHANEDIOL
lig 16
EDO
A
1809 41,2-ETHANEDIOL
lig 17
EDO
A
1810 41,2-ETHANEDIOL
lig 18
EDO
A
1811 41,2-ETHANEDIOL
lig 19
EDO
A
1812 41,2-ETHANEDIOL
lig 20
DMS
A
1813 4DIMETHYL SULFOXIDE