Analysis of Ligand-Protein Contacts in PDB entry:
5B34


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 5B34. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
RET
A
301 20RETINAL
lig 2
4QL
A
302 25 DICARBOXYLIC ACID
lig 3
4QL
A
303 25 DICARBOXYLIC ACID
lig 4
D12
A
306 12DODECANE
lig 5
D10
A
307 10DECANE
lig 6
D10
A
308 10DECANE
lig 7
R16
A
309 16HEXADECANE
lig 8
D10
A
310 10DECANE
lig 9
HP6
A
311 7HEPTANE
lig 10
HP6
A
312 7HEPTANE
lig 11
HP6
A
313 7HEPTANE
lig 12
DD9
A
314 9NONANE
lig 13
D12
A
315 12DODECANE
lig 14
D12
A
316 12DODECANE
lig 15
D12
A
317 12DODECANE
lig 16
DD9
A
318 9NONANE