Analysis of Ligand-Protein Contacts in PDB entry:
5B72


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 21 ligands in PDB entry 5B72. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
198 10PHOSPHOSERINE
lig 2
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
SO4
A
801 5SULFATE ION
lig 5
OSM
A
802 41-(OXIDOSULFANYL)METHANAMINE
lig 6
IOD
A
803 1IODIDE ION
lig 7
IOD
A
804 1IODIDE ION
lig 8
IOD
A
805 1IODIDE ION
lig 9
PGE
A
806 10TRIETHYLENE GLYCOL
lig 10
PGE
A
807 10TRIETHYLENE GLYCOL
lig 11
NAG
A
808 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
A
809 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
A
812 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
CA
A
813 1CALCIUM ION
lig 15
IOD
A
814 1IODIDE ION
lig 16
IOD
A
815 1IODIDE ION
lig 17
IOD
A
816 1IODIDE ION
lig 18
IOD
A
817 1IODIDE ION
lig 19
IOD
A
818 1IODIDE ION
lig 20
IOD
A
819 1IODIDE ION
lig 21
HEM
A
820 43PROTOPORPHYRIN IX CONTAINING FE