Analysis of Ligand-Protein Contacts in PDB entry:
5BMV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 5BMV. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GTP
A
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 2
MG
A
502 1MAGNESIUM ION
lig 3
CA
A
503 1CALCIUM ION
lig 4
GOL
A
504 6GLYCEROL
lig 5
GOL
A
505 6GLYCEROL
lig 6
GOL
A
506 6GLYCEROL
lig 7
GDP
B
501 28GUANOSINE-5'-DIPHOSPHATE
lig 8
MG
B
502 1MAGNESIUM ION
lig 9
CA
B
503 1CALCIUM ION
lig 10
MES
B
504 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 11
MES
B
505 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 12
GOL
B
506 6GLYCEROL
lig 13
GTP
C
501 32GUANOSINE-5'-TRIPHOSPHATE
lig 14
MG
C
502 1MAGNESIUM ION
lig 15
CA
C
503 1CALCIUM ION
lig 16
GOL
C
504 6GLYCEROL
lig 17
GOL
C
505 6GLYCEROL
lig 18
GOL
C
506 6GLYCEROL
lig 19
VLB
C
507 59(2ALPHA,2'BETA,3BETA,4ALPHA,5BETA)-VINCALE
lig 20
GDP
D
501 28GUANOSINE-5'-DIPHOSPHATE
lig 21
MG
D
502 1MAGNESIUM ION
lig 22
ACP
F
401 31PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE EST