Analysis of Ligand-Protein Contacts in PDB entry:
5BO9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 5BO9. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
FUC
D
3 10ALPHA-L-FUCOPYRANOSE
lig 6
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NGS
F
1 192-ACETAMIDO-2-DEOXY-6-O-SULFO-BETA-D-GLUCO
lig 9
GAL
F
2 11BETA-D-GALACTOPYRANOSE
lig 10
SIA
F
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 11
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NGS
I
1 192-ACETAMIDO-2-DEOXY-6-O-SULFO-BETA-D-GLUCO
lig 16
GAL
I
2 11BETA-D-GALACTOPYRANOSE
lig 17
SIA
I
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 18
NAG
A
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
CSF
A
412 42 ACID
lig 20
NAG
B
405 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
B
406 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
CSF
B
410 42 ACID