Analysis of Ligand-Protein Contacts in PDB entry:
5BR6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 5BR6. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
GAL
E
2 11BETA-D-GALACTOPYRANOSE
lig 3
SIA
E
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 4
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 7
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 9
FUC
F
6 10ALPHA-L-FUCOPYRANOSE
lig 10
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
GAL
G
2 11BETA-D-GALACTOPYRANOSE
lig 12
SIA
G
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 13
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 16
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 18
FUC
H
6 10ALPHA-L-FUCOPYRANOSE
lig 19
NAG
A
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
A
402 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
A
403 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
A
404 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
C
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
C
402 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
C
403 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
C
404 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE