Analysis of Ligand-Protein Contacts in PDB entry:
5D08


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 5D08. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SF4
A
501 8IRON/SULFUR CLUSTER
lig 2
SF4
A
502 8IRON/SULFUR CLUSTER
lig 3
B12
A
503 91COBALAMIN
lig 4
GOL
A
504 6GLYCEROL
lig 5
PO4
A
505 5PHOSPHATE ION
lig 6
PO4
A
506 5PHOSPHATE ION
lig 7
CL
A
507 1CHLORIDE ION
lig 8
SF4
B
501 8IRON/SULFUR CLUSTER
lig 9
SF4
B
502 8IRON/SULFUR CLUSTER
lig 10
B12
B
503 91COBALAMIN
lig 11
GOL
B
504 6GLYCEROL
lig 12
CL
B
505 1CHLORIDE ION