Analysis of Ligand-Protein Contacts in PDB entry:
5D29


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 5D29. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 8
BMA
D
4 11BETA-D-MANNOPYRANOSE
lig 9
NAG
A
803 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
A
804 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
A
805 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
A
806 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
ZN
A
813 1ZINC ION
lig 14
ZN
A
814 1ZINC ION
lig 15
CA
A
815 1CALCIUM ION
lig 16
CL
A
816 1CHLORIDE ION
lig 17
ACT
A
817 4ACETATE ION
lig 18
5Q1
A
818 20 PENTYL]BENZOIC ACID