Analysis of
Ligand-Protein
Contacts in PDB entry:
Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
There are 4 ligands
in PDB entry 5D3Q.
Click on ligand of interest for
LPC analysis.
| HET
ID | Chain
ID |
Residue
N | Number
of atoms
| Ligand name |
|---|
| lig 1 |
GDP | A
| 801 |
28 | GUANOSINE-5'-DIPHOSPHATE
|
| lig 2 |
EDO | A
| 802 |
4 | 1,2-ETHANEDIOL
|
| lig 3 |
GDP | B
| 801 |
28 | GUANOSINE-5'-DIPHOSPHATE
|
| lig 4 |
EDO | B
| 802 |
4 | 1,2-ETHANEDIOL
|