Analysis of Ligand-Protein Contacts in PDB entry:
5D5D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 5D5D. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NA
A
501 1SODIUM ION
lig 2
NA
A
502 1SODIUM ION
lig 3
CA
A
503 1CALCIUM ION
lig 4
LDA
A
504 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 5
LDA
A
505 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 6
LDA
A
506 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 7
LDA
A
507 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 8
LDA
A
508 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 9
LDA
A
509 16LAURYL DIMETHYLAMINE-N-OXIDE
lig 10
LDA
A
510 13LAURYL DIMETHYLAMINE-N-OXIDE
lig 11
PE5
A
511 83,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 12
PE5
A
512 123,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 13
PE5
A
513 123,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 14
PE5
A
514 93,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 15
PE5
A
515 123,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
lig 16
78M
A
516 22(2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-EN
lig 17
78M
A
517 22(2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-EN
lig 18
MES
A
518 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 19
MES
A
519 122-(N-MORPHOLINO)-ETHANESULFONIC ACID