Analysis of Ligand-Protein Contacts in PDB entry:
5D5L


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 55 ligands in PDB entry 5D5L. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GTP
A
1 32GUANOSINE-5'-TRIPHOSPHATE
lig 2
GTP
B
1 32GUANOSINE-5'-TRIPHOSPHATE
lig 3
GTP
C
1 32GUANOSINE-5'-TRIPHOSPHATE
lig 4
GTP
D
1 32GUANOSINE-5'-TRIPHOSPHATE
lig 5
CS
A
101 1CESIUM ION
lig 6
CS
A
102 1CESIUM ION
lig 7
CS
A
103 1CESIUM ION
lig 8
CS
A
104 1CESIUM ION
lig 9
CS
A
105 1CESIUM ION
lig 10
CS
A
106 1CESIUM ION
lig 11
CS
A
107 1CESIUM ION
lig 12
CS
A
108 1CESIUM ION
lig 13
CS
A
109 1CESIUM ION
lig 14
CS
A
110 1CESIUM ION
lig 15
CS
A
111 1CESIUM ION
lig 16
CS
A
112 1CESIUM ION
lig 17
CS
A
113 1CESIUM ION
lig 18
CS
A
114 1CESIUM ION
lig 19
CS
A
115 1CESIUM ION
lig 20
CS
A
116 1CESIUM ION
lig 21
PRF
A
117 137-DEAZA-7-AMINOMETHYL-GUANINE
lig 22
MG
A
118 1MAGNESIUM ION
lig 23
MG
A
119 1MAGNESIUM ION
lig 24
MG
A
120 1MAGNESIUM ION
lig 25
MG
A
121 1MAGNESIUM ION
lig 26
MG
A
122 1MAGNESIUM ION
lig 27
MG
A
123 1MAGNESIUM ION
lig 28
CS
B
101 1CESIUM ION
lig 29
CS
B
102 1CESIUM ION
lig 30
CS
B
103 1CESIUM ION
lig 31
CS
B
104 1CESIUM ION
lig 32
CS
B
105 1CESIUM ION
lig 33
CS
B
106 1CESIUM ION
lig 34
CS
B
107 1CESIUM ION
lig 35
CS
B
108 1CESIUM ION
lig 36
PRF
B
109 137-DEAZA-7-AMINOMETHYL-GUANINE
lig 37
MG
B
110 1MAGNESIUM ION
lig 38
MG
B
111 1MAGNESIUM ION
lig 39
MG
B
112 1MAGNESIUM ION
lig 40
CS
C
101 1CESIUM ION
lig 41
CS
C
102 1CESIUM ION
lig 42
CS
C
103 1CESIUM ION
lig 43
PRF
C
104 137-DEAZA-7-AMINOMETHYL-GUANINE
lig 44
MG
C
105 1MAGNESIUM ION
lig 45
MG
C
106 1MAGNESIUM ION
lig 46
MG
C
107 1MAGNESIUM ION
lig 47
CS
D
101 1CESIUM ION
lig 48
CS
D
102 1CESIUM ION
lig 49
CS
D
103 1CESIUM ION
lig 50
CS
D
104 1CESIUM ION
lig 51
CS
D
105 1CESIUM ION
lig 52
PRF
D
106 137-DEAZA-7-AMINOMETHYL-GUANINE
lig 53
MG
D
107 1MAGNESIUM ION
lig 54
MG
D
108 1MAGNESIUM ION
lig 55
MG
D
109 1MAGNESIUM ION