Analysis of Ligand-Protein Contacts in PDB entry:
5D61


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 5D61. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PHQ
L
1 10BENZYL CHLOROCARBONATE
lig 2
CF0
L
5 1FLUOROMETHANE
lig 3
GAL
B
1 12BETA-D-GALACTOPYRANOSE
lig 4
FUC
B
2 10ALPHA-L-FUCOPYRANOSE
lig 5
GLA
B
3 11ALPHA-D-GALACTOPYRANOSE
lig 6
GLA
C
1 12ALPHA-D-GALACTOPYRANOSE
lig 7
FUC
C
2 10ALPHA-L-FUCOPYRANOSE
lig 8
GLA
C
3 11ALPHA-D-GALACTOPYRANOSE
lig 9
GLA
D
1 12ALPHA-D-GALACTOPYRANOSE
lig 10
FUC
D
2 10ALPHA-L-FUCOPYRANOSE
lig 11
GLA
D
3 11ALPHA-D-GALACTOPYRANOSE
lig 12
EDO
A
310 41,2-ETHANEDIOL
lig 13
EDO
A
311 41,2-ETHANEDIOL
lig 14
EDO
A
312 41,2-ETHANEDIOL
lig 15
CL
A
313 1CHLORIDE ION
lig 16
CA
A
314 1CALCIUM ION
lig 17
CA
A
315 1CALCIUM ION
lig 18
DMS
A
316 4DIMETHYL SULFOXIDE
lig 19
NA
A
317 1SODIUM ION