Analysis of Ligand-Protein Contacts in PDB entry:
5D9P


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 5D9P. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NBG
C
1 15N-ACETYL-BETA-D-GLUCOPYRANOSYLAMINE
lig 2
BGC
C
2 11BETA-D-GLUCOPYRANOSE
lig 3
BGC
C
3 11BETA-D-GLUCOPYRANOSE
lig 4
BGC
C
4 11BETA-D-GLUCOPYRANOSE
lig 5
XYS
C
5 9ALPHA-D-XYLOPYRANOSE
lig 6
XYS
C
6 9ALPHA-D-XYLOPYRANOSE
lig 7
XYS
C
7 9ALPHA-D-XYLOPYRANOSE
lig 8
NBG
D
1 15N-ACETYL-BETA-D-GLUCOPYRANOSYLAMINE
lig 9
BGC
D
2 11BETA-D-GLUCOPYRANOSE
lig 10
BGC
D
3 11BETA-D-GLUCOPYRANOSE
lig 11
BGC
D
4 11BETA-D-GLUCOPYRANOSE
lig 12
XYS
D
5 9ALPHA-D-XYLOPYRANOSE
lig 13
XYS
D
6 9ALPHA-D-XYLOPYRANOSE
lig 14
XYS
D
7 9ALPHA-D-XYLOPYRANOSE
lig 15
NBG
E
1 15N-ACETYL-BETA-D-GLUCOPYRANOSYLAMINE
lig 16
BGC
E
2 11BETA-D-GLUCOPYRANOSE
lig 17
BGC
E
3 11BETA-D-GLUCOPYRANOSE
lig 18
BGC
E
4 11BETA-D-GLUCOPYRANOSE
lig 19
XYS
E
5 9ALPHA-D-XYLOPYRANOSE
lig 20
XYS
E
6 9ALPHA-D-XYLOPYRANOSE
lig 21
XYS
E
7 9ALPHA-D-XYLOPYRANOSE
lig 22
NBG
F
1 15N-ACETYL-BETA-D-GLUCOPYRANOSYLAMINE
lig 23
BGC
F
2 11BETA-D-GLUCOPYRANOSE
lig 24
BGC
F
3 11BETA-D-GLUCOPYRANOSE
lig 25
BGC
F
4 11BETA-D-GLUCOPYRANOSE
lig 26
XYS
F
5 9ALPHA-D-XYLOPYRANOSE
lig 27
XYS
F
6 9ALPHA-D-XYLOPYRANOSE
lig 28
XYS
F
7 9ALPHA-D-XYLOPYRANOSE
lig 29
CA
A
401 1CALCIUM ION
lig 30
CA
B
401 1CALCIUM ION