Analysis of Ligand-Protein Contacts in PDB entry:
5DB1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 5DB1. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
58O
A
601 35 INDOLE-2-CARBONITRILE
lig 2
DMS
A
602 4DIMETHYL SULFOXIDE
lig 3
SO4
A
603 5SULFATE ION
lig 4
SO4
A
604 5SULFATE ION
lig 5
SO4
A
605 5SULFATE ION
lig 6
SO4
A
606 5SULFATE ION
lig 7
SO4
A
607 5SULFATE ION
lig 8
PG4
A
608 13TETRAETHYLENE GLYCOL
lig 9
PG4
A
609 7TETRAETHYLENE GLYCOL
lig 10
DMS
A
610 4DIMETHYL SULFOXIDE
lig 11
DMS
A
611 4DIMETHYL SULFOXIDE
lig 12
PG4
A
612 10TETRAETHYLENE GLYCOL