Analysis of Ligand-Protein Contacts in PDB entry:
5DDD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 5DDD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
59X
A
601 25 D]PYRIMIDINE
lig 2
SO4
A
602 5SULFATE ION
lig 3
SO4
A
603 5SULFATE ION
lig 4
SO4
A
604 5SULFATE ION
lig 5
SO4
A
605 5SULFATE ION
lig 6
DMS
A
606 4DIMETHYL SULFOXIDE
lig 7
DMS
A
608 4DIMETHYL SULFOXIDE
lig 8
PG4
A
609 13TETRAETHYLENE GLYCOL
lig 9
PEG
A
610 7DI(HYDROXYETHYL)ETHER
lig 10
DMS
A
611 4DIMETHYL SULFOXIDE