Analysis of Ligand-Protein Contacts in PDB entry:
5DDU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 5DDU. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PMP
A
601 164'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE
lig 2
GOL
A
602 6GLYCEROL
lig 3
GOL
A
603 6GLYCEROL
lig 4
PGE
A
604 10TRIETHYLENE GLYCOL
lig 5
PMP
B
601 164'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE
lig 6
GOL
B
602 6GLYCEROL
lig 7
GOL
B
603 6GLYCEROL
lig 8
GOL
B
604 6GLYCEROL
lig 9
PMP
C
601 164'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE
lig 10
GOL
C
602 6GLYCEROL
lig 11
GOL
C
603 6GLYCEROL
lig 12
GOL
C
604 6GLYCEROL
lig 13
GOL
C
605 6GLYCEROL
lig 14
PMP
D
601 164'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE