Analysis of Ligand-Protein Contacts in PDB entry:
5DLW


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 31 ligands in PDB entry 5DLW. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
B
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
B
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
B
7 11ALPHA-D-MANNOPYRANOSE
lig 8
ZN
A
901 1ZINC ION
lig 9
ZN
A
902 1ZINC ION
lig 10
CA
A
903 1CALCIUM ION
lig 11
NKP
A
904 29 ENOATE
lig 12
5D5
A
905 34 DIHYDROXY-24-OXOCHOLAN-24-YL]AMINO}ETHANE
lig 13
NA
A
906 1SODIUM ION
lig 14
NA
A
907 1SODIUM ION
lig 15
IOD
A
915 1IODIDE ION
lig 16
IOD
A
916 1IODIDE ION
lig 17
IOD
A
917 1IODIDE ION
lig 18
IOD
A
918 1IODIDE ION
lig 19
IOD
A
919 1IODIDE ION
lig 20
IOD
A
920 1IODIDE ION
lig 21
IOD
A
921 1IODIDE ION
lig 22
IOD
A
922 1IODIDE ION
lig 23
IOD
A
923 1IODIDE ION
lig 24
IOD
A
924 1IODIDE ION
lig 25
IOD
A
925 1IODIDE ION
lig 26
IOD
A
926 1IODIDE ION
lig 27
IOD
A
927 1IODIDE ION
lig 28
SCN
A
928 3THIOCYANATE ION
lig 29
SCN
A
929 3THIOCYANATE ION
lig 30
GOL
A
930 6GLYCEROL
lig 31
GOL
A
931 6GLYCEROL