Analysis of Ligand-Protein Contacts in PDB entry:
5DO4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 5DO4. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CFZ
A
6 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 2
CFZ
A
11 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 3
UMS
A
12 212'-METHYLSELENYL-2'-DEOXYURIDINE-5'-PHOSPH
lig 4
UFT
A
17 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 5
ADS
A
18 22ADENOSINE-5'-(DITHIO)PHOSPHATE
lig 6
CFZ
A
19 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 7
UFT
A
20 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 8
UMS
A
21 212'-METHYLSELENYL-2'-DEOXYURIDINE-5'-PHOSPH
lig 9
CFZ
A
23 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 10
CFZ
A
24 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 11
CFZ
A
25 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 12
0G6
H
301 30 PROLINAMIDE
lig 13
NAG
H
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
EDO
H
303 41,2-ETHANEDIOL
lig 15
EDO
H
304 41,2-ETHANEDIOL
lig 16
EDO
H
305 41,2-ETHANEDIOL
lig 17
EDO
H
306 41,2-ETHANEDIOL
lig 18
GOL
H
307 6GLYCEROL
lig 19
GOL
H
308 6GLYCEROL
lig 20
CA
H
309 1CALCIUM ION
lig 21
MRD
A
101 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 22
MG
A
102 1MAGNESIUM ION