Analysis of Ligand-Protein Contacts in PDB entry:
5DUV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 5DUV. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BGC
E
1 12BETA-D-GLUCOPYRANOSE
lig 2
GAL
E
2 11BETA-D-GALACTOPYRANOSE
lig 3
BGC
F
1 12BETA-D-GLUCOPYRANOSE
lig 4
GAL
F
2 11BETA-D-GALACTOPYRANOSE
lig 5
BGC
G
1 12BETA-D-GLUCOPYRANOSE
lig 6
GAL
G
2 11BETA-D-GALACTOPYRANOSE
lig 7
BGC
H
1 12BETA-D-GLUCOPYRANOSE
lig 8
GAL
H
2 11BETA-D-GALACTOPYRANOSE
lig 9
CA
A
202 1CALCIUM ION
lig 10
CA
B
202 1CALCIUM ION
lig 11
CA
C
202 1CALCIUM ION
lig 12
ACT
C
203 4ACETATE ION
lig 13
CA
D
202 1CALCIUM ION
lig 14
ACT
D
203 4ACETATE ION