Analysis of Ligand-Protein Contacts in PDB entry:
5DYS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 5DYS. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ACE
A
0 3ACETYL GROUP
lig 2
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 5
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 6
BMA
B
5 11BETA-D-MANNOPYRANOSE
lig 7
RET
A
401 20RETINAL
lig 8
ACT
A
402 4ACETATE ION
lig 9
ACT
A
403 4ACETATE ION
lig 10
BOG
A
404 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 11
PLM
A
405 17PALMITIC ACID
lig 12
PLM
A
406 17PALMITIC ACID
lig 13
BOG
A
412 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 14
SO4
A
413 5SULFATE ION