Analysis of Ligand-Protein Contacts in PDB entry:
5DYW


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 55 ligands in PDB entry 5DYW. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
FUC
D
3 10ALPHA-L-FUCOPYRANOSE
lig 6
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
FUC
F
3 10ALPHA-L-FUCOPYRANOSE
lig 11
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
FUL
H
3 10BETA-L-FUCOPYRANOSE
lig 16
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
FUL
I
3 10BETA-L-FUCOPYRANOSE
lig 19
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
FUL
J
3 10BETA-L-FUCOPYRANOSE
lig 22
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
FUL
K
3 10BETA-L-FUCOPYRANOSE
lig 25
5HF
A
601 32 METHOXYETHYL)NAPHTHALENE-2-SULFONAMIDE
lig 26
GOL
A
602 6GLYCEROL
lig 27
GOL
A
603 6GLYCEROL
lig 28
GOL
A
604 6GLYCEROL
lig 29
GOL
A
605 6GLYCEROL
lig 30
EDO
A
606 41,2-ETHANEDIOL
lig 31
EDO
A
607 41,2-ETHANEDIOL
lig 32
EDO
A
608 41,2-ETHANEDIOL
lig 33
EDO
A
609 41,2-ETHANEDIOL
lig 34
EDO
A
610 41,2-ETHANEDIOL
lig 35
EDO
A
611 41,2-ETHANEDIOL
lig 36
CL
A
612 1CHLORIDE ION
lig 37
CL
A
613 1CHLORIDE ION
lig 38
PG4
A
614 13TETRAETHYLENE GLYCOL
lig 39
NAG
A
625 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
5HF
B
601 32 METHOXYETHYL)NAPHTHALENE-2-SULFONAMIDE
lig 41
GOL
B
602 6GLYCEROL
lig 42
GOL
B
603 6GLYCEROL
lig 43
GOL
B
604 6GLYCEROL
lig 44
GOL
B
605 6GLYCEROL
lig 45
GOL
B
606 6GLYCEROL
lig 46
EDO
B
607 41,2-ETHANEDIOL
lig 47
EDO
B
608 41,2-ETHANEDIOL
lig 48
EDO
B
609 41,2-ETHANEDIOL
lig 49
CL
B
610 1CHLORIDE ION
lig 50
CL
B
611 1CHLORIDE ION
lig 51
NAG
B
612 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
B
613 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
NAG
B
614 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
NAG
B
621 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
NAG
B
625 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE