Analysis of Ligand-Protein Contacts in PDB entry:
5DYY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 37 ligands in PDB entry 5DYY. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CSO
A
66 7S-HYDROXYCYSTEINE
lig 2
CSO
B
66 7S-HYDROXYCYSTEINE
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
FUC
C
2 10ALPHA-L-FUCOPYRANOSE
lig 5
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
FUL
E
2 10BETA-L-FUCOPYRANOSE
lig 9
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
FUL
G
3 10BETA-L-FUCOPYRANOSE
lig 14
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
FUL
H
3 10BETA-L-FUCOPYRANOSE
lig 17
GOL
A
601 6GLYCEROL
lig 18
GOL
A
602 6GLYCEROL
lig 19
GOL
A
603 6GLYCEROL
lig 20
EDO
A
604 41,2-ETHANEDIOL
lig 21
5HH
A
605 28 SULFONAMIDE
lig 22
CL
A
606 1CHLORIDE ION
lig 23
NAG
A
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
A
614 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
GOL
B
601 6GLYCEROL
lig 26
GOL
B
602 6GLYCEROL
lig 27
EDO
B
603 41,2-ETHANEDIOL
lig 28
EDO
B
604 41,2-ETHANEDIOL
lig 29
5HH
B
605 28 SULFONAMIDE
lig 30
CL
B
606 1CHLORIDE ION
lig 31
NAG
B
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
B
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
B
609 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
B
613 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
B
614 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
B
615 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
B
616 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE