Analysis of Ligand-Protein Contacts in PDB entry:
5E7O


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 79 ligands in PDB entry 5E7O. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SF4
A
1001 8IRON/SULFUR CLUSTER
lig 2
MO
A
1002 1MOLYBDENUM ATOM
lig 3
MGD
A
1003 47 DINUCLEOTIDE
lig 4
MD1
A
1004 47 ESTER GUANYLATE ESTER
lig 5
EDO
A
1005 41,2-ETHANEDIOL
lig 6
EDO
A
1006 41,2-ETHANEDIOL
lig 7
EDO
A
1007 41,2-ETHANEDIOL
lig 8
GOL
A
1008 6GLYCEROL
lig 9
EDO
A
1009 41,2-ETHANEDIOL
lig 10
EDO
A
1010 41,2-ETHANEDIOL
lig 11
EDO
B
401 41,2-ETHANEDIOL
lig 12
F3S
B
402 7FE3-S4 CLUSTER
lig 13
SF4
B
403 8IRON/SULFUR CLUSTER
lig 14
SF4
B
404 8IRON/SULFUR CLUSTER
lig 15
SF4
B
405 8IRON/SULFUR CLUSTER
lig 16
EDO
B
406 41,2-ETHANEDIOL
lig 17
SF4
C
1001 8IRON/SULFUR CLUSTER
lig 18
MO
C
1002 1MOLYBDENUM ATOM
lig 19
MGD
C
1003 47 DINUCLEOTIDE
lig 20
MD1
C
1004 47 ESTER GUANYLATE ESTER
lig 21
EDO
C
1005 41,2-ETHANEDIOL
lig 22
EDO
C
1006 41,2-ETHANEDIOL
lig 23
EDO
C
1007 41,2-ETHANEDIOL
lig 24
F3S
D
401 7FE3-S4 CLUSTER
lig 25
SF4
D
402 8IRON/SULFUR CLUSTER
lig 26
SF4
D
403 8IRON/SULFUR CLUSTER
lig 27
SF4
D
404 8IRON/SULFUR CLUSTER
lig 28
EDO
D
405 41,2-ETHANEDIOL
lig 29
SF4
E
1001 8IRON/SULFUR CLUSTER
lig 30
MO
E
1002 1MOLYBDENUM ATOM
lig 31
MGD
E
1003 47 DINUCLEOTIDE
lig 32
MD1
E
1004 47 ESTER GUANYLATE ESTER
lig 33
EDO
E
1005 41,2-ETHANEDIOL
lig 34
GOL
E
1006 6GLYCEROL
lig 35
EDO
E
1007 41,2-ETHANEDIOL
lig 36
EDO
F
401 41,2-ETHANEDIOL
lig 37
F3S
F
402 7FE3-S4 CLUSTER
lig 38
SF4
F
403 8IRON/SULFUR CLUSTER
lig 39
SF4
F
404 8IRON/SULFUR CLUSTER
lig 40
SF4
F
405 8IRON/SULFUR CLUSTER
lig 41
EDO
F
406 41,2-ETHANEDIOL
lig 42
SF4
G
1001 8IRON/SULFUR CLUSTER
lig 43
MO
G
1002 1MOLYBDENUM ATOM
lig 44
MGD
G
1003 47 DINUCLEOTIDE
lig 45
MD1
G
1004 47 ESTER GUANYLATE ESTER
lig 46
EDO
G
1005 41,2-ETHANEDIOL
lig 47
EDO
G
1006 41,2-ETHANEDIOL
lig 48
EDO
G
1007 41,2-ETHANEDIOL
lig 49
EDO
G
1008 41,2-ETHANEDIOL
lig 50
F3S
H
401 7FE3-S4 CLUSTER
lig 51
SF4
H
402 8IRON/SULFUR CLUSTER
lig 52
SF4
H
403 8IRON/SULFUR CLUSTER
lig 53
SF4
H
404 8IRON/SULFUR CLUSTER
lig 54
EDO
H
405 41,2-ETHANEDIOL
lig 55
EDO
H
406 41,2-ETHANEDIOL
lig 56
EDO
H
407 41,2-ETHANEDIOL
lig 57
SF4
I
1001 8IRON/SULFUR CLUSTER
lig 58
MO
I
1002 1MOLYBDENUM ATOM
lig 59
MGD
I
1003 47 DINUCLEOTIDE
lig 60
MD1
I
1004 47 ESTER GUANYLATE ESTER
lig 61
EDO
I
1005 41,2-ETHANEDIOL
lig 62
EDO
I
1006 41,2-ETHANEDIOL
lig 63
F3S
J
401 7FE3-S4 CLUSTER
lig 64
SF4
J
402 8IRON/SULFUR CLUSTER
lig 65
SF4
J
403 8IRON/SULFUR CLUSTER
lig 66
SF4
J
404 8IRON/SULFUR CLUSTER
lig 67
EDO
J
405 41,2-ETHANEDIOL
lig 68
SF4
K
1001 8IRON/SULFUR CLUSTER
lig 69
MO
K
1002 1MOLYBDENUM ATOM
lig 70
MGD
K
1003 47 DINUCLEOTIDE
lig 71
MD1
K
1004 47 ESTER GUANYLATE ESTER
lig 72
EDO
K
1005 41,2-ETHANEDIOL
lig 73
EDO
K
1006 41,2-ETHANEDIOL
lig 74
F3S
L
401 7FE3-S4 CLUSTER
lig 75
SF4
L
402 8IRON/SULFUR CLUSTER
lig 76
SF4
L
403 8IRON/SULFUR CLUSTER
lig 77
SF4
L
404 8IRON/SULFUR CLUSTER
lig 78
EDO
L
405 41,2-ETHANEDIOL
lig 79
EDO
L
406 41,2-ETHANEDIOL