Analysis of Ligand-Protein Contacts in PDB entry:
5EBB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 5EBB. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ZN
A
701 1ZINC ION
lig 2
ZN
A
702 1ZINC ION
lig 3
NAG
A
703 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
A
704 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
A
705 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
MLI
A
706 7MALONATE ION
lig 7
ZN
B
701 1ZINC ION
lig 8
ZN
B
702 1ZINC ION
lig 9
NAG
B
703 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
B
704 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
B
705 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
MLI
B
706 7MALONATE ION
lig 13
GOL
B
707 6GLYCEROL
lig 14
ZN
C
701 1ZINC ION
lig 15
ZN
C
702 1ZINC ION
lig 16
NAG
C
703 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
C
704 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
C
705 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
MLI
C
706 7MALONATE ION
lig 20
GOL
C
707 6GLYCEROL