Analysis of Ligand-Protein Contacts in PDB entry:
5EDK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 5EDK. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CGU
A
6 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 2
CGU
A
7 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 3
CGU
A
14 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 4
CGU
A
16 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 5
CGU
A
19 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 6
CGU
A
20 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 7
CGU
A
25 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 8
CGU
A
26 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 9
CGU
A
29 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 10
CGU
A
32 12GAMMA-CARBOXY-GLUTAMIC ACID
lig 11
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
A
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
A
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
MG
A
605 1MAGNESIUM ION
lig 16
MG
A
606 1MAGNESIUM ION
lig 17
MG
A
607 1MAGNESIUM ION
lig 18
MG
A
608 1MAGNESIUM ION