Analysis of Ligand-Protein Contacts in PDB entry:
5EKD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 5EKD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
5BX
A
401 19 3-OXAZOL-4(5H)-ONE
lig 2
ATP
A
402 31ADENOSINE-5'-TRIPHOSPHATE
lig 3
MN
A
403 1MANGANESE (II) ION
lig 4
MN
A
404 1MANGANESE (II) ION
lig 5
5BX
B
401 19 3-OXAZOL-4(5H)-ONE
lig 6
ATP
B
402 31ADENOSINE-5'-TRIPHOSPHATE
lig 7
MN
B
403 1MANGANESE (II) ION
lig 8
MN
B
404 1MANGANESE (II) ION
lig 9
GOL
B
405 6GLYCEROL
lig 10
GOL
B
406 6GLYCEROL