Analysis of Ligand-Protein Contacts in PDB entry:
5ERD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 51 ligands in PDB entry 5ERD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 7
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 10
FUC
E
4 10ALPHA-L-FUCOPYRANOSE
lig 11
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 16
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
A
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
A
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
MAN
A
613 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
A
614 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
A
615 11ALPHA-D-MANNOPYRANOSE
lig 25
CA
A
616 1CALCIUM ION
lig 26
CA
A
617 1CALCIUM ION
lig 27
CA
A
618 1CALCIUM ION
lig 28
CA
A
619 1CALCIUM ION
lig 29
CA
A
620 1CALCIUM ION
lig 30
CA
A
621 1CALCIUM ION
lig 31
CA
A
622 1CALCIUM ION
lig 32
CA
A
623 1CALCIUM ION
lig 33
CA
A
624 1CALCIUM ION
lig 34
CA
A
625 1CALCIUM ION
lig 35
CA
A
626 1CALCIUM ION
lig 36
EDO
A
627 41,2-ETHANEDIOL
lig 37
MAN
B
901 11ALPHA-D-MANNOPYRANOSE
lig 38
MAN
B
902 11ALPHA-D-MANNOPYRANOSE
lig 39
MAN
B
903 11ALPHA-D-MANNOPYRANOSE
lig 40
NAG
B
911 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
CA
B
914 1CALCIUM ION
lig 42
CA
B
915 1CALCIUM ION
lig 43
CA
B
916 1CALCIUM ION
lig 44
CA
B
917 1CALCIUM ION
lig 45
CA
B
918 1CALCIUM ION
lig 46
CA
B
919 1CALCIUM ION
lig 47
CA
B
920 1CALCIUM ION
lig 48
CA
B
921 1CALCIUM ION
lig 49
CA
B
922 1CALCIUM ION
lig 50
CA
B
923 1CALCIUM ION
lig 51
CA
B
924 1CALCIUM ION