Analysis of Ligand-Protein Contacts in PDB entry:
5EVM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 66 ligands in PDB entry 5EVM. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
G
5 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
MAN
I
3 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
MAN
J
3 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
MAN
K
3 11ALPHA-D-MANNOPYRANOSE
lig 17
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
MAN
L
3 11ALPHA-D-MANNOPYRANOSE
lig 20
MAN
L
4 11ALPHA-D-MANNOPYRANOSE
lig 21
MAN
L
5 11ALPHA-D-MANNOPYRANOSE
lig 22
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
MAN
M
3 11ALPHA-D-MANNOPYRANOSE
lig 25
MAN
M
4 11ALPHA-D-MANNOPYRANOSE
lig 26
MAN
M
5 11ALPHA-D-MANNOPYRANOSE
lig 27
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
MAN
P
3 11ALPHA-D-MANNOPYRANOSE
lig 34
MAN
P
4 11ALPHA-D-MANNOPYRANOSE
lig 35
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
MAN
Q
3 11ALPHA-D-MANNOPYRANOSE
lig 38
MAN
Q
4 11ALPHA-D-MANNOPYRANOSE
lig 39
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
MAN
R
3 11ALPHA-D-MANNOPYRANOSE
lig 42
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
MAN
S
3 11ALPHA-D-MANNOPYRANOSE
lig 45
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
MAN
T
3 11ALPHA-D-MANNOPYRANOSE
lig 48
MAN
T
4 11ALPHA-D-MANNOPYRANOSE
lig 49
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
MAN
W
3 11ALPHA-D-MANNOPYRANOSE
lig 56
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
MAN
X
3 11ALPHA-D-MANNOPYRANOSE
lig 59
MAN
X
4 11ALPHA-D-MANNOPYRANOSE
lig 60
MAN
X
5 11ALPHA-D-MANNOPYRANOSE
lig 61
MLI
A
611 7MALONATE ION
lig 62
MLI
B
612 7MALONATE ION
lig 63
MLI
C
610 7MALONATE ION
lig 64
MLI
D
612 7MALONATE ION
lig 65
MLI
E
610 7MALONATE ION
lig 66
MLI
F
611 7MALONATE ION