Analysis of Ligand-Protein Contacts in PDB entry:
5EXD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 5EXD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SF4
B
401 8IRON/SULFUR CLUSTER
lig 2
SF4
B
402 8IRON/SULFUR CLUSTER
lig 3
SF4
C
401 8IRON/SULFUR CLUSTER
lig 4
TPP
C
402 26THIAMINE DIPHOSPHATE
lig 5
MG
C
403 1MAGNESIUM ION
lig 6
SF4
E
401 8IRON/SULFUR CLUSTER
lig 7
SF4
E
402 8IRON/SULFUR CLUSTER
lig 8
SF4
F
401 8IRON/SULFUR CLUSTER
lig 9
O2T
F
402 32 HYDROGEN PHOSPHATE
lig 10
MG
F
403 1MAGNESIUM ION
lig 11
SF4
H
401 8IRON/SULFUR CLUSTER
lig 12
SF4
H
402 8IRON/SULFUR CLUSTER
lig 13
SF4
I
401 8IRON/SULFUR CLUSTER
lig 14
TPP
I
402 26THIAMINE DIPHOSPHATE
lig 15
MG
I
403 1MAGNESIUM ION
lig 16
SF4
K
401 8IRON/SULFUR CLUSTER
lig 17
SF4
K
402 8IRON/SULFUR CLUSTER
lig 18
SF4
L
401 8IRON/SULFUR CLUSTER
lig 19
TPP
L
402 26THIAMINE DIPHOSPHATE
lig 20
MG
L
403 1MAGNESIUM ION