Analysis of Ligand-Protein Contacts in PDB entry:
5F09


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 5F09. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 8
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 11
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 12
NAG
A
803 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
A
806 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
A
807 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
ZN
A
815 1ZINC ION
lig 16
ZN
A
816 1ZINC ION
lig 17
CL
A
817 1CHLORIDE ION
lig 18
CA
A
818 1CALCIUM ION
lig 19
BC8
A
819 22BETA-CITRYL-L-GLUTAMIC ACID
lig 20
PGE
A
820 10TRIETHYLENE GLYCOL