Analysis of Ligand-Protein Contacts in PDB entry:
5F1A


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 23 ligands in PDB entry 5F1A. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
MAN
C
3 11ALPHA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
MAN
D
3 11ALPHA-D-MANNOPYRANOSE
lig 8
SAL
A
601 102-HYDROXYBENZOIC ACID
lig 9
COH
A
602 43PROTOPORPHYRIN IX CONTAINING CO
lig 10
NAG
A
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
AKR
A
608 5ACRYLIC ACID
lig 12
EDO
A
609 41,2-ETHANEDIOL
lig 13
EDO
A
610 41,2-ETHANEDIOL
lig 14
EDO
A
611 41,2-ETHANEDIOL
lig 15
SAL
B
601 102-HYDROXYBENZOIC ACID
lig 16
COH
B
602 43PROTOPORPHYRIN IX CONTAINING CO
lig 17
NAG
B
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
B
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
BOG
B
608 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 20
AKR
B
609 5ACRYLIC ACID
lig 21
AKR
B
610 5ACRYLIC ACID
lig 22
EDO
B
611 41,2-ETHANEDIOL
lig 23
EDO
B
612 41,2-ETHANEDIOL