Analysis of Ligand-Protein Contacts in PDB entry:
5F1W


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 87 ligands in PDB entry 5F1W. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ORD
A
1 8D-ORNITHINE
lig 2
DAL
A
2 5D-ALANINE
lig 3
DVA
A
3 7D-VALINE
lig 4
DLE
A
4 8D-LEUCINE
lig 5
IOY
A
5 12P-IODO-D-PHENYLALANINE
lig 6
DVA
A
6 7D-VALINE
lig 7
DSN
A
8 6D-SERINE
lig 8
ORD
A
9 8D-ORNITHINE
lig 9
DVA
A
10 7D-VALINE
lig 10
DHI
A
11 10D-HISTIDINE
lig 11
MV9
A
13 8(2~{R})-3-METHYL-2-(METHYLAMINO)BUTANOIC A
lig 12
DAL
A
14 5D-ALANINE
lig 13
DTH
A
15 7D-THREONINE
lig 14
DVA
A
16 7D-VALINE
lig 15
ORD
B
1 8D-ORNITHINE
lig 16
DAL
B
2 5D-ALANINE
lig 17
DVA
B
3 7D-VALINE
lig 18
DLE
B
4 8D-LEUCINE
lig 19
IOY
B
5 12P-IODO-D-PHENYLALANINE
lig 20
DVA
B
6 7D-VALINE
lig 21
DSN
B
8 6D-SERINE
lig 22
ORD
B
9 8D-ORNITHINE
lig 23
DVA
B
10 7D-VALINE
lig 24
DHI
B
11 10D-HISTIDINE
lig 25
MV9
B
13 8(2~{R})-3-METHYL-2-(METHYLAMINO)BUTANOIC A
lig 26
DAL
B
14 5D-ALANINE
lig 27
DTH
B
15 7D-THREONINE
lig 28
DVA
B
16 7D-VALINE
lig 29
ORD
C
1 8D-ORNITHINE
lig 30
DAL
C
2 5D-ALANINE
lig 31
DVA
C
3 7D-VALINE
lig 32
DLE
C
4 8D-LEUCINE
lig 33
IOY
C
5 12P-IODO-D-PHENYLALANINE
lig 34
DVA
C
6 7D-VALINE
lig 35
DSN
C
8 6D-SERINE
lig 36
ORD
C
9 8D-ORNITHINE
lig 37
DVA
C
10 7D-VALINE
lig 38
DHI
C
11 10D-HISTIDINE
lig 39
MV9
C
13 8(2~{R})-3-METHYL-2-(METHYLAMINO)BUTANOIC A
lig 40
DAL
C
14 5D-ALANINE
lig 41
DTH
C
15 7D-THREONINE
lig 42
DVA
C
16 7D-VALINE
lig 43
ORD
D
1 8D-ORNITHINE
lig 44
DAL
D
2 5D-ALANINE
lig 45
DVA
D
3 7D-VALINE
lig 46
DLE
D
4 8D-LEUCINE
lig 47
IOY
D
5 12P-IODO-D-PHENYLALANINE
lig 48
DVA
D
6 7D-VALINE
lig 49
DSN
D
8 6D-SERINE
lig 50
ORD
D
9 8D-ORNITHINE
lig 51
DVA
D
10 7D-VALINE
lig 52
DHI
D
11 10D-HISTIDINE
lig 53
MV9
D
13 8(2~{R})-3-METHYL-2-(METHYLAMINO)BUTANOIC A
lig 54
DAL
D
14 5D-ALANINE
lig 55
DTH
D
15 7D-THREONINE
lig 56
DVA
D
16 7D-VALINE
lig 57
ORD
E
1 8D-ORNITHINE
lig 58
DAL
E
2 5D-ALANINE
lig 59
DVA
E
3 7D-VALINE
lig 60
DLE
E
4 8D-LEUCINE
lig 61
IOY
E
5 12P-IODO-D-PHENYLALANINE
lig 62
DVA
E
6 7D-VALINE
lig 63
DSN
E
8 6D-SERINE
lig 64
ORD
E
9 8D-ORNITHINE
lig 65
DVA
E
10 7D-VALINE
lig 66
DHI
E
11 10D-HISTIDINE
lig 67
MV9
E
13 8(2~{R})-3-METHYL-2-(METHYLAMINO)BUTANOIC A
lig 68
DAL
E
14 5D-ALANINE
lig 69
DTH
E
15 7D-THREONINE
lig 70
DVA
E
16 7D-VALINE
lig 71
ORD
F
1 8D-ORNITHINE
lig 72
DAL
F
2 5D-ALANINE
lig 73
DVA
F
3 7D-VALINE
lig 74
DLE
F
4 8D-LEUCINE
lig 75
IOY
F
5 12P-IODO-D-PHENYLALANINE
lig 76
DVA
F
6 7D-VALINE
lig 77
DSN
F
8 6D-SERINE
lig 78
ORD
F
9 8D-ORNITHINE
lig 79
DVA
F
10 7D-VALINE
lig 80
DHI
F
11 10D-HISTIDINE
lig 81
MV9
F
13 8(2~{R})-3-METHYL-2-(METHYLAMINO)BUTANOIC A
lig 82
DAL
F
14 5D-ALANINE
lig 83
DTH
F
15 7D-THREONINE
lig 84
DVA
F
16 7D-VALINE
lig 85
SO4
B
101 5SULFATE ION
lig 86
MPD
B
102 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 87
MPD
C
101 8(4S)-2-METHYL-2,4-PENTANEDIOL